PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.13D8C
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 335aa    MW: 37457.8 Da    PI: 4.7495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.13D8CgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.5e-12152197555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+++ +++  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Araip.13D8C 152 HIMAERKRREKLSQSLIALAALIPGL-----KKMDKASVLGDAIKYVKELQ 197
                  999***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.135147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-15151209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-9152197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-11152201No hitNo description
SuperFamilySSF474595.23E-16152210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-13153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MEELNASATN WLSDLDIDDY ELFSECNLKK FLDEDEENQF DEMVMSAVLG EEEEEEEERP  60
TKQLRTCSSS SITNYVSSNS SSSSSPTSQI LSFENSYNPS SQFYGFEFDA TPNDKVSPQP  120
QVGNNNDKNK VEQTRKPQSQ GSKRHAAHSH DHIMAERKRR EKLSQSLIAL AALIPGLKKM  180
DKASVLGDAI KYVKELQGRL KVLEEENKRE VESVVIVKNP RFITSSSDDD SSSCDDDTLE  240
ADGEAAVAHV EARVAAAEKE VLLRIHCKKQ KGIYVKLLSE IQSLHLYVVH SSVLPFGDSV  300
LDITIVAQMG TEYKLSIRDL VRNLRVATLK TMSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160ERKRRE
2156161RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201562.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLI1MVF86e-93I1MVF8_SOYBN; BHLH transcription factor
STRINGGLYMA17G16720.12e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110691238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-37bHLH family protein